Nothing
create_test_sleeplog_csv = function(Nnights = 7,
storagelocation = c(),
advanced = FALSE,
sep = ",") {
# function to create a test sleeplog file needed for testing GGIR
# Nnights is the number of nights the sleeplog has
if (length(storagelocation) == 0) storagelocation = getwd()
if (Nnights == 0) Nnights = 1
Nnights = 7
if (advanced == FALSE) {
sleeplog = as.data.frame(t(c("123",rep(c("23:00:00","07:00:00"),Nnights))), stringsAsFactors = TRUE)
sleeplog[, 4:5] = c("03:00:00", "17:00:00") # let's add one night where the person slept untill the afternoon
colnames(sleeplog) = c("ID",rep(c("onset","wakeup"),Nnights))
write.table(
sleeplog,
file = paste0(storagelocation, "/testsleeplogfile.csv"),
row.names = FALSE,
col.names = TRUE,
sep = ",",
fileEncoding = "UTF-8"
)
} else {
times = c("07:00:00", "23:00:00", "13:00:00", "13:30:00", "15:00:00", "15:40:00", "17:00:00", "17:15:00")
# when creating calendar dates create one date extra compared with number of nights
dates = seq(as.Date("2016/06/25"), as.Date("2016/06/25") + Nnights + 1, by = 1)
Cnames = c(
"_wakeup",
"_inbed",
"_nap1_start",
"_nap1_end",
"_nap2_start",
"_nap2_end",
"_nonwear1_off",
"_nonwear1_on"
)
names = "ID"
log = c()
for (di in 1:length(dates)) {
if (di < 10) { # include day number in the time, to ease testing sleeplog processing
times2 = gsub(pattern = ":00:00", replacement = paste0(":00:0",di), x = times)
} else {
times2 = gsub(pattern = ":00:00", replacement = paste0(":00:", ifelse(di < 59, yes = di, no = "00")),
x = times)
}
log = c(log, as.character(dates[di]), times2)
names = c(names, c(paste0("D",di,"_date"),paste0("D",di, Cnames)))
}
sleeplog = as.data.frame(t(c("123A",log)), stringsAsFactors = TRUE)
colnames(sleeplog) = names
data.table::fwrite(sleeplog, file = paste0(storagelocation,"/testsleeplogfile.csv"),
row.names = FALSE, col.names = TRUE, sep = sep)
}
}
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