Geneland: Detection of Structure from Multilocus Genetic Data

Stochastic simulation and MCMC inference of structure from genetic data.

Install the latest version of this package by entering the following in R:
install.packages("Geneland")
AuthorGilles Guillot, Filipe Santos, Arnaud Estoup
Date of publication2016-09-01 19:31:58
MaintainerGilles Guillot <gigu@dtu.dk>
LicenseGPL
Version4.0.6
http://www2.imm.dtu.dk/~gigu/Geneland/

View on CRAN

Man pages

Functions

coordinates Man page
EstimateFreqNA Man page
FormatGenotypes Man page
Fstat Man page
Fstat.output Man page
Geneland Man page
Geneland.GUI Man page
Geneland-package Man page
genotypes Man page
gl2gp Man page
HZ Man page
MCMC Man page
nullify Man page
PlotDrift Man page
PlotFreq Man page
PlotFreqA Man page
Plotnpop Man page
Plotntile Man page
PlotTessDyn Man page
PlotTessellation Man page
PosteriorMode Man page
PostProcessChain Man page
show.estimate.hz Man page
show.simdata Man page
simdata Man page
simFmodel Man page

Files

inst
inst/CITATION
inst/images
inst/images/icon-configure.gif
inst/images/icon-hybridzone.gif
inst/images/icon-run.gif
inst/images/line.gif
inst/images/icon-convert.gif
inst/images/icon-fmodel.gif
inst/images/icon-fstat.gif
inst/images/illustration_geneland.JPG
inst/images/icon-postprocess.gif
inst/images/icon-run2.gif
inst/images/icon-output.gif
inst/images/geneland6.gif
inst/images/icon-draw.gif
inst/images/icon-plot.gif
inst/images/icon-ok.gif
inst/images/pleasewait.gif
inst/images/geneland6.gif.SAVE
inst/images/icon-ibd.gif
src
src/alarousset.f
src/main.f
src/ggfstat.f
src/hz.f
src/wrapper.c
NAMESPACE
data
data/coordinates.txt.gz
data/genotypes.txt.gz
R
R/PlotFreqA.R R/show.estimate.hz.R R/Plotnpop.R R/PosteriorMode.R R/PlotTessellation.R R/MCMC.R R/PostProcessChain.R R/HZ.R R/simdata.R R/PlotDrift.R R/FormatGenotypes.R R/nullify.R R/PlotTessDyn.R R/show.simdata.R R/simFmodel.R R/Fstat.output.R R/Geneland.GUI.R R/gl2gp.R R/PlotFreq.R R/EstimateFreqNA.R R/Plotntile.R R/Fstat.R
vignettes
vignettes/Geneland-Doc.tex
vignettes/dag3.pdf
vignettes/fig
vignettes/fig/postproc.jpg
vignettes/fig/multip_run.jpg
vignettes/fig/dag-final.pdf_t
vignettes/fig/MyMap_zoom7.jpeg
vignettes/fig/wdl1.jpeg
vignettes/fig/example_spatial3_bis.jpeg
vignettes/fig/map.jpeg
vignettes/fig/power.jpeg
vignettes/fig/npop.jpeg
vignettes/fig/vor2.jpeg
vignettes/fig/example_spatial3_ter.jpeg
vignettes/fig/choosesep.jpg
vignettes/fig/MCMC.jpg
vignettes/fig/multip_run2.jpg
vignettes/fig/choosefiles.jpg
vignettes/fig/vor1.jpeg
vignettes/fig/exp_q_quart.jpeg
vignettes/fig/initial.jpg
vignettes/fig/example_spatial2_bis.jpeg
vignettes/fig/parallel.jpg
vignettes/fig/dag3.pdf_t
vignettes/fig/example_spatial_bis.jpeg
vignettes/fig/MyMap_zoom10.jpeg
vignettes/fig/output.jpg
vignettes/dag-final.pdf
vignettes/Geneland-Doc.pdf
MD5
DESCRIPTION
ChangeLog
man
man/show.simdata.Rd man/Fstat.output.Rd man/Plotnpop.Rd man/PostProcessChain.Rd man/PlotFreq.Rd man/PlotTessDyn.Rd man/MCMC.Rd man/Plotntile.Rd man/PosteriorMode.Rd man/Fstat.Rd man/PlotDrift.Rd man/nullify.Rd man/Geneland.GUI.Rd man/genotypes.Rd man/coordinates.Rd man/simdata.Rd man/HZ.Rd man/gl2gp.Rd man/simFmodel.Rd man/EstimateFreqNA.Rd man/Geneland-package.Rd man/PlotFreqA.Rd man/FormatGenotypes.Rd man/PlotTessellation.Rd man/show.estimate.hz.Rd

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