Description Usage Arguments Value Author(s)

Takes genotype data as a matrix with one line per individual and two columns per locus, with alleles coded by integers (number of replications for micro-satellites data). Build a new matrix with alleles codes as consecutive integers. If a locus has 7 alleles they will be coded as 1,2,...7. Since version 1.0.1, this function does not have to be called by users. It is called through MCMC.

1 | ```
FormatGenotypes(genotypes,ploidy)
``` |

`genotypes` |
A matrix with one line per individual and two columns per locus, with alleles coded by integers |

`ploidy` |
1 or 2 |

A list with elements:

`genotypes` |
a matrix with one line per individual and one or two columns per locus with alleles coded by integers |

`allele.numbers` |
a vector giving the number of possible alleles per locus |

Gilles Guillot

Geneland documentation built on April 14, 2017, 2:31 p.m.

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