PosteriorMode: Map of mode of posterior distribution of population...

In Geneland: Detection of Structure from Multilocus Genetic Data

Description

Plots a map giving the modal population as a color code for each pixel.

Usage

PosteriorMode(coordinates,path.mcmc,plotit=TRUE,format="pdf",new.dev=TRUE,
                          printit=FALSE,file,main.title)

Arguments

coordinates	Spatial coordinates of individuals. A matrix with 2 columns and one line per individual.
path.mcmc	Path to output files directory
plotit	Logical: if TRUE the map is plotted
printit	Logical : if TRUE, figures are also printed
format	"ps" or "pdf"
file	Character : Path to file where figures should be printed
main.title	Character : Title to appear on top of the graphic
new.dev	Logical. Open a new graphical device if TRUE and printit is FALSE

Author(s)

Gilles Guillot

References

G. Guillot, Estoup, A., Mortier, F. Cosson, J.F. A spatial statistical model for landscape genetics. Genetics, 170, 1261-1280, 2005.

G. Guillot, Mortier, F., Estoup, A. Geneland : A program for landscape genetics. Molecular Ecology Notes, 5, 712-715, 2005.

Geneland documentation built on April 14, 2017, 2:31 p.m.