GeoTcgaData: Processing various types of data on GEO and TCGA

Gene Expression Omnibus(GEO) and The Cancer Genome Atlas (TCGA) provide us with a wealth of data, such as RNA-seq, DNA Methylation, SNP and Copy number variation data. It's easy to download data from TCGA using the gdc tool, but processing these data into a format suitable for bioinformatics analysis requires more work. This R package was developed to handle these data.

Package details

AuthorErqiang Hu [aut, cre]
MaintainerErqiang Hu <>
Package repositoryView on CRAN
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GeoTcgaData documentation built on July 27, 2021, 1:06 a.m.