rep2: Handle the case where one id corresponds to multiple genes

In GeoTcgaData: Processing various types of data on GEO and TCGA

Handle the case where one id corresponds to multiple genes

Description

Handle the case where one id corresponds to multiple genes

Usage

rep2(input_file, string)

Arguments

input_file	input file, a data.frame or a matrix
string	a string,sep of the gene

Value

a data.frame, when an id corresponds to multiple genes, the expression value is deleted

Examples

aa <- c("MARCH1 /// MMA","MARC1","MARCH2 /// MARCH3","MARCH3 /// MARCH4","MARCH1")
bb <- c("2.969058399","4.722410064","8.165514853","8.24243893","8.60815086")
cc <- c("3.969058399","5.722410064","7.165514853","6.24243893","7.60815086")
input_file <- data.frame(aa=aa,bb=bb,cc=cc)
rep2_result <- rep2(input_file," /// ")

GeoTcgaData documentation built on Sept. 23, 2022, 9:05 a.m.