DengueSimR02: Simulated dataset of dengue cases with basic reproductive...
In IDSpatialStats: Estimate Global Clustering in Infectious Disease
Description
Usage
Format
Author(s)
Description
Dataset simulated using an agent based model with a spatially heterogeneous population structure. Infectious agents
were introduced resulting in agent to agent transmission. The distance between successive cases in a transmission chain
were randomly drawn from a uniform distribution U(0,100). Each infectious agent resulted in transmissions to two other
agents after a delay of 15 days, reflecting the generation time of dengue. There are 11 transmission chains, each with
a different genotype. The genotypes are subdivided into four serotypes.
Usage
1
Format
Matrix with five columns representing the X and Y coordinates of infected individuals, the time of infection,
the genotype of the infecting pathogen and the serotype of the infecting pathogen.
Author(s)
Justin Lessler and Henrik Salje
IDSpatialStats documentation built on Aug. 9, 2021, 9:08 a.m.
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Description Usage Format Author(s)
Description
Dataset simulated using an agent based model with a spatially heterogeneous population structure. Infectious agents were introduced resulting in agent to agent transmission. The distance between successive cases in a transmission chain were randomly drawn from a uniform distribution U(0,100). Each infectious agent resulted in transmissions to two other agents after a delay of 15 days, reflecting the generation time of dengue. There are 11 transmission chains, each with a different genotype. The genotypes are subdivided into four serotypes.
Usage
1 |
Format
Matrix with five columns representing the X and Y coordinates of infected individuals, the time of infection, the genotype of the infecting pathogen and the serotype of the infecting pathogen.
Author(s)
Justin Lessler and Henrik Salje
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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