LabelPlot: Coloring specific leaves of a dendrogram

In IntClust: Integration of Multiple Data Sets with Clustering Techniques

Description

The function plots a dendrogrmam of which specific leaves are coloured.

Usage

LabelPlot(Data, sel1, sel2 = NULL, col1 = NULL, col2 = NULL)

Arguments

Data	The result of a method which contains the dendrogram to be colored.
sel1	The selection of objects to be colored. Default is NULL.
sel2	An optional second selection to be colored. Default is NULL.
col1	The color for the first selection. Default is NULL.
col2	The color for the optional second selection. Default is NULL.

Value

A plot of the dendrogram of which the leaves of the selection(s) are colored.

Examples

data(fingerprintMat)
MCF7_F = Cluster(fingerprintMat,type="data",distmeasure="tanimoto",normalize=FALSE,
method=NULL,clust="agnes",linkage="flexible",gap=FALSE,maxK=55,StopRange=FALSE)

ClustF_6=cutree(MCF7_F$Clust,6)

SelF=rownames(fingerprintMat)[ClustF_6==6]
SelF

LabelPlot(Data=MCF7_F,sel1=SelF,sel2=NULL,col1='darkorchid')

IntClust documentation built on May 2, 2019, 5:51 a.m.