LncPath-internal: LncPath internal functions

In LncPath: Identifying the Pathways Regulated by LncRNA Sets of Interest

Description

These functions internally called by other functions in the package LncPath and not meant to be called by the user.

Usage

    initializeLncPathEnvir()
    rw(W, p0, gamma)
    RandomWalk2igraph(igraphM, VertexWeight, EdgeWeight = TRUE, gamma = 0.7)
    lncPath.HeatMapPlot(V, row.names = F, col.labels, col.classes, 
	col.names = F, main = " ", xlab = " ", ylab = " ")
    lncPath.EnrichmentScore(gene.list, gene.set, weighted.score.type = 1, 
	correl.vector = NULL)
    lncPath.EnrichmentScore2(gene.list, gene.set, weighted.score.type = 1, 
	correl.vector = NULL)
    ESNorm(ESs)
    calT(inData, classLabel)
    calFD(inData, classLabel)

Author(s)

Junwei Han <[e-mail]>, Zeguo Sun <[e-mail]>

LncPath documentation built on May 2, 2019, 11:03 a.m.