API for MARVEL
Revealing Splicing Dynamics at Single-Cell Resolution
| Global functions | |
|---|---|
| AnnoVolcanoPlot | Man page Source code |
| AnnotateGenes.10x | Man page Source code |
| AnnotateSJ.10x | Man page Source code |
| AssignModality | Man page Source code |
| BioPathways | Man page Source code |
| BioPathways.10x | Man page Source code |
| BioPathways.Plot | Man page Source code |
| BioPathways.Plot.10x | Man page Source code |
| CheckAlignment | Man page Source code |
| CheckAlignment.10x | Man page Source code |
| CheckAlignment.Exp | Man page Source code |
| CheckAlignment.PSI | Man page Source code |
| CheckAlignment.PSI.Exp | Man page Source code |
| CheckAlignment.SJ | Man page Source code |
| CompareExpr | Man page Source code |
| CompareValues | Man page Source code |
| CompareValues.Exp | Man page Source code |
| CompareValues.Exp.Spliced | Man page Source code |
| CompareValues.Genes.10x | Man page Source code |
| CompareValues.PSI | Man page Source code |
| CompareValues.SJ.10x | Man page Source code |
| ComputePSI | Man page Source code |
| ComputePSI.A3SS | Man page Source code |
| ComputePSI.A5SS | Man page Source code |
| ComputePSI.AFE | Man page Source code |
| ComputePSI.ALE | Man page Source code |
| ComputePSI.MXE | Man page Source code |
| ComputePSI.RI | Man page Source code |
| ComputePSI.SE | Man page Source code |
| CountEvents | Man page Source code |
| CreateMarvelObject | Man page Source code |
| CreateMarvelObject.10x | Man page Source code |
| DetectEvents | Man page Source code |
| DetectEvents.AFE | Man page Source code |
| DetectEvents.AFE.NegStrand | Man page Source code |
| DetectEvents.AFE.PosStrand | Man page Source code |
| DetectEvents.ALE | Man page Source code |
| DetectEvents.ALE.NegStrand | Man page Source code |
| DetectEvents.ALE.PosStrand | Man page Source code |
| FilterGenes.10x | Man page Source code |
| FindPTC | Man page Source code |
| FindPTC.A3SS.NegStrand | Man page Source code |
| FindPTC.A3SS.PosStrand | Man page Source code |
| FindPTC.A5SS.NegStrand | Man page Source code |
| FindPTC.A5SS.PosStrand | Man page Source code |
| FindPTC.RI.NegStrand | Man page Source code |
| FindPTC.RI.PosStrand | Man page Source code |
| FindPTC.SE.NegStrand | Man page Source code |
| FindPTC.SE.PosStrand | Man page Source code |
| IsoSwitch | Man page Source code |
| IsoSwitch.10x | Man page Source code |
| IsoSwitch.PlotExpr | Man page Source code |
| ModalityChange | Man page Source code |
| ParseGTF | Man page Source code |
| PctASE | Man page Source code |
| PlotDEValues | Man page Source code |
| PlotDEValues.Exp.Global | Man page Source code |
| PlotDEValues.Exp.Spliced | Man page Source code |
| PlotDEValues.Genes.10x | Man page Source code |
| PlotDEValues.PSI.Distance | Man page Source code |
| PlotDEValues.PSI.Mean | Man page Source code |
| PlotDEValues.PSI.Mean.g2vsg1 | Man page Source code |
| PlotDEValues.SJ.10x | Man page Source code |
| PlotPctExprCells.Genes.10x | Man page Source code |
| PlotPctExprCells.SJ.10x | Man page Source code |
| PlotValues | Man page Source code |
| PlotValues.Exp | Man page Source code |
| PlotValues.PCA.CellGroup.10x | Man page Source code |
| PlotValues.PCA.Gene.10x | Man page Source code |
| PlotValues.PCA.PSI.10x | Man page Source code |
| PlotValues.PSI | Man page Source code |
| PropModality | Man page Source code |
| PropModality.Bar | Man page Source code |
| PropModality.Doughnut | Man page Source code |
| PropPTC | Man page Source code |
| RunPCA | Man page Source code |
| RunPCA.Exp | Man page Source code |
| RunPCA.PSI | Man page Source code |
| SubsetCrypticA3SS | Man page Source code |
| SubsetSamples | Man page Source code |
| TransformExpValues | Man page Source code |
| ValidateSJ.10x | Man page Source code |
| adhocGene.DE.Gene.10x | Man page Source code |
| adhocGene.DE.PSI.10x | Man page Source code |
| adhocGene.PlotDEValues.10x | Man page Source code |
| adhocGene.PlotSJPosition.10x | Man page Source code |
| adhocGene.TabulateExpression.Gene.10x | Man page Source code |
| adhocGene.TabulateExpression.PSI.10x | Man page Source code |
