extractA: Allele Frequencies

In MasterBayes: ML and MCMC Methods for Pedigree Reconstruction and Analysis

Allele Frequencies

Description

extracts allele frequencies from genotype data

Usage

extractA(G, marker.type="MSW")

Arguments

G	data frame or list of genotype objects
marker.type	"MSW" or "MSC" for co-dominant markers with Wang's (2004) model of genotyping error or CERVUS's model of genotyping error (Marshall, 1998) or "AFLP" for dominant markers.

Value

list of allele frequnecies at each loci

Author(s)

Jarrod Hadfield [e-mail]

See Also

genotype.list, genotype

Examples

## Not run: 
  data(WarblerG)

  A<-extractA(WarblerG)
  A[[1]]

## End(Not run)

MasterBayes documentation built on June 22, 2022, 5:06 p.m.