Files in MethScope

Ultra-Fast Analysis of Sparse DNA Methylome via Recurrent Pattern Encoding

MD5

README.md

NAMESPACE

DESCRIPTION

LICENSE

R/sysdata.rda

R/PredictCellType.R R/GenerateInput.R R/VisualizeOutput.R R/ModelTraining.R R/utils.R

src/cfile.h

src/cdata.h

src/Makevars

src/index.c

src/kstring.h

src/wzmisc.h

src/wvec.h

src/cfile.c

src/kstring.c

src/format7.c

src/summary.c

src/decompress.c

src/init.c

src/wztarget.h

src/bgzf.h

src/wzio.h

src/format6.c

src/index.h

src/snames.h

src/khash.h

src/format3.c

src/format.c

src/bgzf.c

src/wzbed.h

src/format2.c

inst/COPYRIGHTS

inst/WORDLIST

inst/doc/MethScope-Tutorial.Rmd inst/doc/MethScope-MRMP.Rmd inst/doc/MethScope-Tutorial.R

inst/doc/MethScope-MRMP.html

inst/doc/MethScope-Tutorial.html

inst/doc/MethScope-MRMP.R

inst/extdata/toy.cg

inst/extdata/toy.cg.idx

inst/extdata/toy.cm

build/vignette.rds

tests/spelling.R vignettes/MethScope-Tutorial.Rmd vignettes/MethScope-MRMP.Rmd man/PlotF1.Rd man/PlotConfusion.Rd man/GenerateReference.Rd man/PredictCellType.Rd man/PlotUMAP_fixedwindow.Rd man/PlotUMAP.Rd man/filter_cell.Rd man/confidence_score.Rd man/nnls_deconv.Rd man/confidence_score_top95.Rd man/smooth_matrix.Rd man/imputeRowMean.Rd man/GenerateInput.Rd man/Input_training.Rd

man/figures/logo.png

MethScope documentation built on Feb. 27, 2026, 1:08 a.m.