smooth_matrix: Smooth cell by pattern matrix to reduce noise
In MethScope: Ultra-Fast Analysis of Sparse DNA Methylome via Recurrent Pattern Encoding
View source: R/PredictCellType.R
smooth_matrix R Documentation
Smooth cell by pattern matrix to reduce noise
Description
Smooth cell by pattern matrix to reduce noise
Usage
smooth_matrix(predictMatrix, KNeighbor = 5)
Arguments
predictMatrix
A wide cell by pattern matrix generated from GenerateInput function
KNeighbor
Number of knn neighbors to use for smoothing (Default: 5)
Value
A wide cell by pattern matrix after smoothing and knn graph
MethScope documentation built on Feb. 27, 2026, 1:08 a.m.
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View source: R/PredictCellType.R
| smooth_matrix | R Documentation |
Smooth cell by pattern matrix to reduce noise
Description
Smooth cell by pattern matrix to reduce noise
Usage
smooth_matrix(predictMatrix, KNeighbor = 5)
Arguments
predictMatrix |
A wide cell by pattern matrix generated from GenerateInput function |
KNeighbor |
Number of knn neighbors to use for smoothing (Default: 5) |
Value
A wide cell by pattern matrix after smoothing and knn graph
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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