Nothing
library(shiny)
library(dygraphs)
library(NMproject)
.currentwd <- get(".currentwd", envir = NMproject:::.sso_env)
.m <- get(".m", envir = NMproject:::.sso_env)
setwd(.currentwd)
gen_run_table <- function(){
d <- nm_row(.m)
d$target <- NULL
d$run_dir <- NULL
d$results_dir <- NULL
d$unique_id <- NULL
d$output_location <- NULL
d
}
get_plot_bootstrapjs_div <- function(plot_object_list) {
#### local_function
get_col_div <- function(plot_object_list, index, css_class = 'col-xs-12 col-sm-4') {
col_div <- div(class = css_class)
if(length(plot_object_list) >= index) {
plotname <- paste("plot", index, sep="")
plot_output_object <- dygraphOutput(plotname)
col_div <- tagAppendChild(col_div, plot_output_object)
}
return(col_div)
}
#
get_plot_div <- function(plot_object_list) {
result_div <- div(class = 'container-fluid')
suppressWarnings(for(i in seq(1,length(plot_object_list),3)) {
row_div <- div(class = 'row')
row_div <- tagAppendChild(row_div, get_col_div(plot_object_list, i))
row_div <- tagAppendChild(row_div, get_col_div(plot_object_list, i+1))
row_div <- tagAppendChild(row_div, get_col_div(plot_object_list, i+2))
result_div <- tagAppendChild(result_div, row_div)
})
return(result_div)
}
####
plot_output_list_div <- get_plot_div(plot_object_list)
return(plot_output_list_div)
}
function(input, output, session) {
session$onSessionEnded(stopApp)
## run table
new_table <- eventReactive(input$refresh_db,
gen_run_table(),
ignoreNULL = FALSE)
output$run_table <- DT::renderDataTable({
new_table()
}, server = FALSE, rownames = FALSE, options = list(paging=TRUE,
searching=TRUE,
filtering=TRUE,
ordering=TRUE)
)
objects <- eventReactive(input$run_table_rows_selected,{
.m[input$run_table_rows_selected]
})
output$runs_selected_info <- renderTable({
if(length(input$run_table_rows_selected)==0) return(data.frame())
new_table()[input$run_table_rows_selected,c("run_id","type","ctl_name")]
})
output$runs_selected_info2 <- renderTable({
if(length(input$run_table_rows_selected)==0) return(data.frame())
new_table()[input$run_table_rows_selected,c("run_id","type","ctl_name")]
})
observeEvent(input$go_to_monitor, {
if(length(input$run_table_rows_selected)==0)
return(showModal(modalDialog(
title = "Error",
"Select a run first"
)))
updateNavbarPage(session, "mainPanel", selected = "monitor")
})
observeEvent(input$go_to_results, {
if(length(input$run_table_rows_selected)==0)
return(showModal(modalDialog(
title = "Error",
"Select run(s) first"
)))
updateNavbarPage(session, "mainPanel", selected = "results")
})
observeEvent(input$back_to_db, {
updateNavbarPage(session, "mainPanel", selected = "database")
})
observeEvent(input$back_to_db2, {
updateNavbarPage(session, "mainPanel", selected = "database")
})
# ## run monitor
#
output$monitor_select_warning <- renderText({
if(length(input$run_table_rows_selected)>1) return("Warning: will only monitor first")
if(length(input$run_table_rows_selected)==0) return("Warning: no runs selected")
})
output$results_select_warning <- renderText({
if(length(input$run_table_rows_selected)==0) return("Warning: no runs selected")
})
status_ob <- eventReactive(
list(input$refresh_status,
input$run_table_rows_selected,
plot_iter_ob
),
{
object <- objects()[[1]]
status(object)
}
)
output$status <- renderText({
status_ob()
})
tail_ob <- reactivePoll(1000, session,
# This function returns the time that log_file was last modified
checkFunc = function(){
if(length(input$run_table_rows_selected)==0) return("")
object <- isolate(objects())[[1]]
tail_lst(object)
},
# This function returns the content of log_file
valueFunc = function() {
object <- isolate(objects())[[1]]
tail_lst(object)
}
)
output$tail_lst <- renderUI({
tail_ob <- tail_ob()
tail_ob <- do.call(paste,c(as.list(tail_ob),sep='<br/>'))
HTML(tail_ob)
})
plot_iter_ob <- eventReactive(
list(input$refresh_plot,
input$run_table_rows_selected),{
object <- objects()[[1]]
psn_ext_path <- object %>% nm_output_path("ext")
#if(is.null(object$output$psn.ext)) return(dygraph(data.frame(x=0,y=0)))
if(!file.exists(psn_ext_path)) return(dygraph(data.frame(x=0,y=0)))
d <- try(plot_iter_data(object,trans = input$trans, skip = 0),silent=TRUE)
if(inherits(d,"try-error")) return(dygraph(data.frame(x=0,y=0)))
p <- list()
for(i in seq_along(unique(d$variable))){
var_name <- unique(d$variable)[i]
dt <- d[d$variable %in% var_name,c("ITERATION","value")]
p[[i]] <- dygraph(dt,main=var_name,xlab="Iteration",group = "hi") %>%
dyOptions(drawPoints = TRUE, pointSize = 2, sigFigs=3) %>%
dyRangeSelector()
}
p
}
)
#
output$distPlot <- renderUI({
get_plot_bootstrapjs_div(plot_iter_ob())
})
observe(
for (i in 1:50) {
local({
my_i <- i
plotname <- paste("plot", my_i, sep="")
output[[plotname]] <- renderDygraph({
plot_iter_ob()[[my_i]]
})
})
}
)
#
# ## run record
run_record_ob <- eventReactive(
list(input$refresh_run_record,
input$run_table_rows_selected),{
#orig.dir <- getwd(); setwd(.currentwd) ; on.exit(setwd(orig.dir))
tryCatch(#do.call(run_record,objects()),
rr(objects()),
error=function(e){
data.frame()
})
})
output$run_record <- DT::renderDataTable({
run_record_ob()
},rownames = FALSE,options = list(paging=FALSE,
searching=FALSE,
filtering=FALSE,
ordering=TRUE))
}
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