addAgeQuery: Query to add the age of the individuals at a certain date

In PatientProfiles: Identify Characteristics of Patients in the OMOP Common Data Model

Query to add the age of the individuals at a certain date

Description

'r lifecycle::badge("experimental")' Same as 'addAge()', except query is not computed to a table.

Usage

addAgeQuery(
  x,
  indexDate = "cohort_start_date",
  ageName = "age",
  ageGroup = NULL,
  ageMissingMonth = 1,
  ageMissingDay = 1,
  ageImposeMonth = FALSE,
  ageImposeDay = FALSE,
  missingAgeGroupValue = "None"
)

Arguments

x	Table with individuals in the cdm.
indexDate	Variable in x that contains the date to compute the age.
ageName	Name of the new column that contains age.
ageGroup	List of age groups to be added.
ageMissingMonth	Month of the year assigned to individuals with missing month of birth. By default: 1.
ageMissingDay	day of the month assigned to individuals with missing day of birth. By default: 1.
ageImposeMonth	Whether the month of the date of birth will be considered as missing for all the individuals.
ageImposeDay	Whether the day of the date of birth will be considered as missing for all the individuals.
missingAgeGroupValue	Value to include if missing age.

Value

tibble with the age column added.

Examples

cdm <- mockPatientProfiles()

cdm$cohort1 |>
  addAgeQuery()
mockDisconnect(cdm = cdm)

PatientProfiles documentation built on Oct. 30, 2024, 9:13 a.m.