sampleGenomegffTSV: sampleGenomegffTSV
In ProActive: Detect Elevations and Gaps in Mapped Sequencing Read Coverage
sampleGenomegffTSV R Documentation
sampleGenomegffTSV
Description
Gene annotations associated with the genome in the sampleGenomePileup
Report...
Usage
sampleGenomegffTSV
Format
## 'sampleGenomegffTSV'
A data frame with 85,575 rows and 9 columns:
- V1
seqid
- V2
source
- V3
type
- V4
start
- V5
end
- V6
score
- V7
strand
- V8
phase
- V9
attributes
Details
This is a standard .gff file format. The .gff file was generated by
running PROKKA with default parameters on the *Salmonella enterica* LT2 genome
sequence (NCBI RefSeq NC_003197.2) associated with the sampleGenomePileup in
the ProActive package.
ProActive documentation built on April 4, 2025, 12:58 a.m.
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| sampleGenomegffTSV | R Documentation |
sampleGenomegffTSV
Description
Gene annotations associated with the genome in the sampleGenomePileup Report...
Usage
sampleGenomegffTSV
Format
## 'sampleGenomegffTSV' A data frame with 85,575 rows and 9 columns:
- V1
seqid
- V2
source
- V3
type
- V4
start
- V5
end
- V6
score
- V7
strand
- V8
phase
- V9
attributes
Details
This is a standard .gff file format. The .gff file was generated by running PROKKA with default parameters on the *Salmonella enterica* LT2 genome sequence (NCBI RefSeq NC_003197.2) associated with the sampleGenomePileup in the ProActive package.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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