ProNet-package: Biological Network Construction, Visulization and Analyses

Description Details Author(s)

Description

High-throughput experiments are now widely used in biological researches, which improves both the quality and quantity of omics data. Network-based presentation of these data has become a popular way in data analyses. This package mainly provides functions for biological network construction, visulization and analyses. Networks can be constructed either from experimental data or from a set of proteins and integrated PPI database. Based on them, users can perform traditional visulization, along with the subcellular location based ones for Homo spaiens and Arabidopsis thaliana. Furthermore, analyses including topological statistics, functional module clustering and go profiling can also be achieved.

Details

Package: ProNet
Type: Package
Version: 1.0.0
Date: 2015-10-16
License: GPL (>= 2)

Author(s)

Xiang-Yun Wu and Xia-Yu Xia

Maintainer: Xia-Yu Xia <[email protected]>


ProNet documentation built on May 30, 2017, 2:02 a.m.