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# Copyright (c) 2016 - 2024, Adrian Dusa
# All rights reserved.
#
# Redistribution and use in source and binary forms, with or without
# modification, in whole or in part, are permitted provided that the
# following conditions are met:
# * Redistributions of source code must retain the above copyright
# notice, this list of conditions and the following disclaimer.
# * Redistributions in binary form must reproduce the above copyright
# notice, this list of conditions and the following disclaimer in the
# documentation and/or other materials provided with the distribution.
# * The names of its contributors may NOT be used to endorse or promote
# products derived from this software without specific prior written
# permission.
#
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
# ARE DISCLAIMED. IN NO EVENT SHALL ADRIAN DUSA BE LIABLE FOR ANY
# DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
# LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
# ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
`findmin` <- function(chart, ...) {
dots <- list(...)
verbose <- isTRUE(dots$verbose)
if (!methods::is(chart, "QCA_pic")) {
if (!is.matrix(chart) | (!is.logical(chart) & length(setdiff(chart, 0:1)) > 0)) {
admisc::stopError(
"Use a logical, TRUE/FALSE matrix. See makeChart()'s output.",
... = ...
)
}
}
cpi <- !is.null(attr(chart, "C_PI"))
if (!cpi) {
chart <- t(chart)
}
if (all(colSums(chart) > 0)) {
gurobi <- !isFALSE(attr(chart, "gurobi")) &&
!isFALSE(dots$gurobi) &&
eval(parse(
text = "requireNamespace('gurobi', quietly = TRUE)"
))
just_minima <- !isTRUE(attr(chart, "solind")) && !isTRUE(dots$solind)
if (gurobi) {
chart <- matrix(as.numeric(chart), nrow = nrow(chart))
model <- list(
A = chart,
obj = rep(1, ncol(chart)),
modelsense = "min",
rhs = rep(1, nrow(chart)),
sense = rep(">=", nrow(chart)),
vtype = "B"
)
params <- list(
OutputFlag = verbose * 1,
LogToConsole = verbose * 1
)
tc <- admisc::tryCatchWEM(
solution <- eval(parse(text = "gurobi::gurobi(model, params)"))$x
)
if (!is.null(tc$error)) {
gurobi <- FALSE
if (cpi) {
message(
sprintf(
"%s, using lpSolve instead.",
ifelse(
grepl("license", tc$error),
"No valid Gurobi license found",
"Gurobi threw an error"
)
)
)
}
}
gurobi <- is.null(tc)
}
if (!gurobi) {
solution <- lpSolve::lp(
"min",
rep(1, ncol(chart)),
chart,
">=",
1,
int.vec = seq(nrow(chart)),
all.bin = TRUE
)$solution
}
if (just_minima | any(solution > 0 & solution < 1)) {
solution <- as.integer(ceiling(sum(solution)))
}
}
else {
solution <- 0L
}
class(solution) <- c(class(solution), "QCA_findmin")
return(solution)
}
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