transpose.OTU: Take the Transpose of an OTU Table

In RAM: R for Amplicon-Sequencing-Based Microbial-Ecology

Description

Returns the transpose of the given OTU table, excluding the last column (which should contain taxonomic information).

Usage

transpose.OTU(data)

Arguments

data	The OTU table to be transposed.

Value

Returns a data frame with rows equal to the columns of the original OTU, and columns equal to the rows of the original OTU. (Excluding the taxonomy column).

Author(s)

Wen Chen and Joshua Simpson.

Examples

data(ITS1)
ITS1.t <- transpose.OTU(ITS1)

Example output

Loading required package: vegan
Loading required package: permute
Loading required package: lattice
This is vegan 2.5-4
Loading required package: ggplot2

RAM documentation built on May 2, 2019, 3:04 p.m.