HSQC_15N: Simulates H1-N15 HSQC spectra for a given entry or list of...

In RBMRB: BMRB Data Access and Visualization

Description

Simulates H1-N15 HSQC(Hetronuclear Single Quantum Coherence) spectra directly from BMRB database. Default plot type will be 'scatter'.Peaks from different spectra(entries) can be connected based on residue numbers by specifying plot type as 'line'. By default it will generate interactive graphics using plotly library

Usage

HSQC_15N(idlist, type = "scatter", interactive = TRUE)

Arguments

idlist	list of bmrb ids in csv
type	scatter/line default=scatter
interactive	TRUE/FALSE default=TRUE

Value

R plot object

See Also

HSQC_13C and TOCSY

Examples

#plot_hsqc<-HSQC_15N(c(17074,17076,17077))
#simulates N15-HSQC spectra for the given 3 entreis
#plot_hsqc<-HSQC_15N(18857,'line')
#simulates the N15-HSQC spectra from many chemical shift lists from a single entry
#plot_hsqc<-HSQC_15N(c(17074,17076,17077),interactive=FALSE)
#example for non interactive plots

Example output

RBMRB documentation built on July 11, 2021, 5:06 p.m.