Description Usage Arguments Value See Also Examples
Plots the histogram (or) density of chemical shift distribution of a given list of atoms. Atoms from different residues cam be specified as "residue-atom". Exammple "ALA-CA","GLN-HE21","GLN-HE*"
1 2 3 4 5 6 7 | chemical_shift_hists(
atm = NA,
type = "count",
bw = 0.1,
cutoff = 8,
interactive = TRUE
)
|
atm |
list Example: c("ALA-CA","GLY-CA") |
type |
count ; other than count will assume density plot |
bw |
binwith for histogram; default value 0.1ppm |
cutoff |
values not with in the cutoff time standard deviation from both sides ofthe mean will be excluded from the plot;default value 8 |
interactive |
TRUE/FALSE default TRUE |
R plot object
fetch_res_chemical_shifts
,filter_residue
and chem_shift_corr
and atom_chem_shift_corr
1 2 3 4 | #plt<-chemical_shift_hists(c('ALA-C*'))
#plots the histogram of all atoms of ALA
#plt<-chemical_shift_hists(c("GLY-H*","ALA-HA"),type='density')
#plots the density plot
|
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