fetch_res_chemical_shifts: Imports chemical shift data for a given amino acid/nucleic...

Description Usage Arguments Value See Also Examples

View source: R/RBMRB.R

Description

Downloads chemical shift data from BMRB macromolecular database for a given amino acid (or) nucleic acid. Optionally particular atom can be specified in the parameter

Usage

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fetch_res_chemical_shifts(res = "*", atm = "*")

Arguments

res

residue name in NMR-STAR atom nomenclature ; Example: ALA,GLY ; default '*' (all residues)

atm

atom name in NMR-STAR nomenclautre ; Example :CA,HB2; default * (all atoms)

Value

R data frame that contains full chemical shift list for a given atom

See Also

fetch_atom_chemical_shifts,filter_residue and chemical_shift_hist

Examples

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#df<-fetch_res_chemical_shifts('GLY')
# Downloads chemical shift data of all atoms of GLY
#df<-fetch_res_chemical_shifts('ALA','CA')
# Downloads C alpha chemical shifts of ALA from macromolecules database at BMRB

Example output



RBMRB documentation built on May 2, 2019, 10:13 a.m.