Description Usage Arguments Value See Also Examples
Plots the histogram (or) density of chemical shift distribution of all atoms of a given amino acid (or) nucleic acid from BMRB database.
1 2 3 4 5 6 | chemical_shift_hist_res(
res = "*",
type = "count",
cutoff = 8,
interactive = TRUE
)
|
res |
residue name in NMR-STAR atom nomenclature ; Example: ALA,GLY |
type |
count ; other than count will assume density plot |
cutoff |
values not with in the cutoff time standard deviation from both sides ofthe mean will be excluded from the plot;default value 8 |
interactive |
TRUE/FALSE default TRUE |
R plot object
fetch_res_chemical_shifts
,filter_residue
and chem_shift_corr
and atom_chem_shift_corr
1 2 3 4 | #plt<-chemical_shift_hist_res('ALA')
#plots the histogram of all atoms of ALA
#plt<-chemical_shift_hist('GLY',type='density')
#plots the density plot
|
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