W303_S: Sequence read coverage for wild type S.cerevisiae W303...

In Repliscope: Replication Timing Profiling using DNA Copy Number

Sequence read coverage for wild type S.cerevisiae W303 replicating sample

Description

Sequence read coverage for wild type replicating sample (T7107 strain). The cells were stained with DNA dye and sorted based on DNA content into S phase fraction. Extracted DNA was sequenced and mapped to sacCer3 genome. Unique reads were calculated in 1 kb genomic bins.

Usage

data(W303_S)

Format

data frame with 11820 rows and 5 variables:

chrom

short chromosome name

chromStart

left chromosome coordinate

chromEnd

right chromosome coordinate

name

sample name

score

read number in current bin

Source

SRA

References

Natsume et al. (2013) Mol Cell 50(5):661-74 (PubMed)

Examples

data(W303_S)

Repliscope documentation built on Sept. 13, 2022, 9:05 a.m.