compareRatios: A function to compare two replication profiles

In Repliscope: Replication Timing Profiling using DNA Copy Number

A function to compare two replication profiles

Description

compareRatios takes two ratio dataframes that were binned the same way and uses z-score statistics to find p-values of their differences. The function outputs a combined dataframe containing the two input ratio dataframes in a long format with added 'p.value' column.

Usage

compareRatios(ratio1, ratio2)

Arguments

ratio1	Ratio dataframe, or a string containing name of a ratio dataframe (dataframe or string).
ratio2	Ratio dataframe, or a string containing name of a ratio dataframe (dataframe or string).

Examples

ratioDFs <- compareRatios(W303norm,Dbf4myc)

Repliscope documentation built on Sept. 13, 2022, 9:05 a.m.