search_rna_quantifications: Search for RNA Quantifications

Description Usage Arguments Examples

View source: R/search.R

Description

Search for RNA Quantifications

Usage

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search_rna_quantifications(client, rna_quantification_set_id,
  page_size = NULL, page_token = NULL)

Arguments

client

A ga4gh_client object

rna_quantification_set_id

The ID of the RNA Quantification Set to search within

page_size

Specifies the maximum number of results to return in a single page. If unspecified, the client default will be used.

page_token

The continuation token, which is used to page through large result sets. To get the next page of results, set this parameter to the value of nextPageToken from the previous response.

Examples

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ref_client <- ga4gh_client("http://1kgenomes.ga4gh.org", api_location = "")

## Not run: 

library(magrittr)
## Find a dataset to search in
datasets <- ref_client %>% search_datasets() %>% content()
d_id <- datasets$datasets[[1]]$id

## Find an rna quantification set to search in
rna_quantification_sets <- ref_client %>%
 search_rna_quantification_sets(d_id) %>% content()
rqs_id <- rna_quantification_sets$rnaQuantificationSets[[1]]$id

## Search for rna quantifications in the rna quantification set
rna_quantifications <- ref_client %>%
 search_rna_quantifications(rqs_id) %>% content()
rna_quantifications

## End(Not run)

Rga4gh documentation built on May 29, 2017, 9:12 a.m.