Description Usage Arguments Author(s) Examples
Count the frequencies of 32 trinucleotide in a region respectively
1 | get.tn(chr, start.bp, end.bp, ref.dir)
|
chr |
Chromosome |
start.bp |
Starting position |
end.bp |
Ending position |
ref.dir |
Path to a directory containing the reference genome. |
Fan Fan
1 2 3 4 5 | example.ref.dir <- paste0(
path.package("SeqKat"),
"/extdata/test/ref/"
);
get.tn(chr=4, start.bp=1, end.bp=-1, example.ref.dir)
|
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