Description Usage Arguments Details Author(s)
This function plots the results obtained by the analyse_TL.MAAD function.
1 2 3 4 5 6 7 | plot_TL.SAR(sample.name, sample.position, fitting.parameters = list(fit.method
= "LIN", fit.weighted = FALSE, fit.rDoses.min = NA, fit.rDoses.max = NA),
eval.Tmin, eval.Tmax, temperatures, names, names.duplicated, doses, Lx, Tx,
LxTx, Lx.plateau, Tx.plateau, LxTx.plateau, DP.Q.line, DP.Q.line.error,
GC.Q.line, GC.Q.LxTx, GC.Q.LxTx.error, GC.Q.slope, Q.DP, Q.DP.error, Q.GC,
Q.GC.error, TxTn, rejection.values, plotting.parameters = list(plot.Tmin =
0, plot.Tmax = NA))
|
sample.name |
character (required): Sample name. |
sample.position |
integer (required): aliquot position. |
fitting.parameters |
list (with default): list containing the fitting parameters. See details. |
eval.Tmin |
integer (required): Temperature (<c2><b0>C) of the lower boundary for the signal integration. |
eval.Tmax |
integer (required): Temperature (<c2><b0>C) of the upper boundary for the signal integration. |
temperatures |
numeric (required): temperature vector |
names |
character (required): Name vector for the regenerative curves. |
names.duplicated |
character (required): Name vector for the duplicated doses. |
doses |
numeric (required): Dose vector for the regenerative curves. |
Lx |
numeric (required): Lx matrix for the regenerative curves. |
Tx |
numeric (required): Tx matrix for the regenerative curves. |
LxTx |
numeric (required): Lx/Tx matrix for the regenerative curves. |
Lx.plateau |
numeric (required): Ln/Lx matrix for the regenerative curves. |
Tx.plateau |
numeric (required): Tn/Tx matrix for the regenerative curves. |
LxTx.plateau |
numeric (required): (Ln/Tn)/(Lx/Tx) matrix for the regenerative curves. |
DP.Q.line |
numeric (required): Vector containing the estimation of Q for each T<c2><b0> step. |
DP.Q.line.error |
numeric (required): Vector containing the uncertainty on the estimation of Q for each T<c2><b0> step. |
GC.Q.line |
numeric (required): growth curve for Q |
GC.Q.LxTx |
numeric (required): Lx/Tx vector used for Q estimation using the growth curve approach. |
GC.Q.LxTx.error |
numeric (required): Error on the Lx/tx vector used for Q estimation using the growth curve approach. |
GC.Q.slope |
numeric (required): growth curve parameters for Q |
Q.DP |
numeric (required): Q estimation using the dose plateau approach |
Q.DP.error |
numeric (required): Uncertainty on the Q estimation using the dose plateau approach |
Q.GC |
numeric (required): Q estimation using the growth curve approach |
Q.GC.error |
numeric (required): Uncertainty on the Q estimation using the growth curve approach |
TxTn |
numeric (required): average Tx/Tn value for the regenerative curves. |
rejection.values |
list (required): result of the rejection tests. |
plotting.parameters |
list (with default): list containing the plotting parameters. See details. |
Fitting parameters
The fitting parameters are:
method
character: Fitting method (LIN
, EXP
, EXP+LIN
or EXP+EXP
).
fit.weighted
logical: If the fitting is weighted or not.
fit.rDoses.min
numeric: Lower regenerative dose used for the fitting.
fit.rDoses.max
numeric: Higher regenerative dose used for the fitting.
See also calc_TL.SAR.fit.
Plotting parameters
The plotting parameters are:
plot.Tmin
numeric: Lower temperature plotted.
plot.Tmax
numeric: Higher temperature plotted.
no.plot
logical: If TRUE
, the results will not be plotted.
See also plot_TL.SAR.
David Strebler
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