Description Usage Arguments Details Value Author(s) See Also
View source: R/script_TL.pretreatment.R
This script call a series of data pretreatment functions for TL dating. It only requires the name of the files with the TL curves and the relative error on the measurement.
1 2 3 4 5 | script_TL.pretreatment(file.name, k = 1, remove.discs = NULL,
file.parameters = list(file.extension = ".binx", folder.in = "./",
folder.out = "./"), aligning.parameters = list(peak.Tmin = NULL, peak.Tmax =
NULL, no.testdose = FALSE), plotting.parameters = list(plot.Tmin = 0,
plot.Tmax = NA, no.plot = FALSE))
|
file.name |
character (required): Name of the file containing the luminescence data. |
k |
numeric (with default): Corrective factor for estimating the uncertainties using a poisson distribution. |
remove.discs |
numeric (with default): list containing the position of the aliquots to remove. |
file.parameters |
list (with default): list containing the file parameters. See details. |
aligning.parameters |
list (with default): list containing the aligning parameters. See details. |
plotting.parameters |
list (with default): list containing the plotting parameters. See details. |
Aligning parameters
The aligning parameters are:
peak.Tmin
numeric: Lower boundary for looking at the peak maximum position.
peak.Tmax
numeric: Upper boundary for looking at the peak maximum position.
no.testdose
logical: If TRUE
, the function will use the Lx curves rather the Tx curves as reference for the peak maximum position.
Plotting parameters
The plotting parameters are:
plot.Tmin
numeric: Lower temperature plotted.
plot.Tmax
numeric: Higher temperature plotted.
no.plot
logical: If TRUE
, the results will not be plotted.
See also plot_TL.MAAD.
File parameters
The plotting parameters are:
file.extension
character (with default): extension of the file containing the luminescence data (.bin or .binx)
folder.in
character (with default): Folder containing the file with the luminescene data.
folder.out
character (with default): Folder containing the file with the new luminescene data.
see also mod_update.dType.
This function return a TLum.Analysis
where the preheat were removed, the background substract and the peaks aligned.
Its save the result as a .binx file il the specified folder.
And, its plots the results from the differents functions called using:
plot_extract.TL,
plot_remove.preheat,
plot_substract.background and
plot_align.peaks.
David Strebler, University of Cologne (Germany),
David Strebler
read_BIN2R, Risoe.BINfileData2TLum.BIN.File, mod_extract.TL, mod_update.dType, mod_remove.aliquot, mod_remove.preheat, mod_substract.background, mod_align.peaks, write_R2BIN.
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