R/getPlasqTypes.R

Defines functions getPlasqTypes

Documented in getPlasqTypes

getPlasqTypes <- function(cdf, ...) {
  requireNamespace("affxparser") || throw("Package not loaded: affxparser")
  cdfGetFields <- affxparser::cdfGetFields
#  cdfMergeAlleles <- affxparser::cdfMergeAlleles


  cdf <- .applyCdfGroups(cdf, .cdfAddPlasqTypes)
  cdf <- .applyCdfGroups(cdf, cdfGetFields, c("plasqType"))
#  cdf <- .applyCdfGroups(cdf, cdfMergeAlleles)
  cdf <- lapply(cdf, FUN=.subset2, "groups")
  cdf
}

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aroma.affymetrix documentation built on May 29, 2024, 4:32 a.m.