Nothing
plot.bayesm.mat=function(x,names,burnin=trunc(.1*nrow(X)),tvalues,TRACEPLOT=TRUE,DEN=TRUE,INT=TRUE,
CHECK_NDRAWS=TRUE,...){
#
# S3 method to print matrices of draws the object X is of class "bayesm.mat"
#
# P. Rossi 2/07
#
X=x
if(mode(X) == "list") stop("list entered \n Possible Fixup: extract from list \n")
if(mode(X) !="numeric") stop("Requires numeric argument \n")
op=par(no.readonly=TRUE)
on.exit(par(op))
on.exit(devAskNewPage(FALSE),add=TRUE)
if(is.null(attributes(X)$dim)) X=as.matrix(X)
nx=ncol(X)
if(nrow(X) < 100 & CHECK_NDRAWS) {cat("fewer than 100 draws submitted \n"); return(invisible())}
if(burnin > nrow(X)) {cat("burnin set larger than number of draws submitted (chk keep) \n");
return(invisible())}
if(!missing(tvalues)){
if(mode(tvalues) !="numeric") {stop("tvalues must be a numeric vector \n")}
else
{if(length(tvalues)!=nx) stop("tvalues are wrong length \n")}
}
if(nx==1) par(mfrow=c(1,1))
if(nx==2) par(mfrow=c(2,1))
if(nx==3) par(mfrow=c(3,1))
if(nx==4) par(mfrow=c(2,2))
if(nx>=5) par(mfrow=c(3,2))
if(missing(names)) {names=as.character(1:nx)}
if (DEN) ylabtxt="density" else ylabtxt="freq"
devAskNewPage(TRUE)
for(index in 1:nx){
hist(X[(burnin+1):nrow(X),index],xlab="",ylab=ylabtxt,main=names[index],freq=!DEN,col="magenta",...)
if(!missing(tvalues)) abline(v=tvalues[index],lwd=2,col="blue")
if(INT){
quants=quantile(X[(burnin+1):nrow(X),index],prob=c(.025,.975))
mean=mean(X[(burnin+1):nrow(X),index])
semean=numEff(X[(burnin+1):nrow(X),index])$stderr
text(quants[1],0,"|",cex=3.0,col="green")
text(quants[2],0,"|",cex=3.0,col="green")
text(mean,0,"|",cex=3.0,col="red")
text(mean-2*semean,0,"|",cex=2,col="yellow")
text(mean+2*semean,0,"|",cex=2,col="yellow")
}
}
if(TRACEPLOT){
if(nx==1) par(mfrow=c(1,2))
if(nx==2) par(mfrow=c(2,2))
if(nx>=3) par(mfrow=c(3,2))
for(index in 1:nx){
plot(as.vector(X[,index]),xlab="",ylab="",main=names[index],type="l",col="red")
if(!missing(tvalues)) abline(h=tvalues[index],lwd=2,col="blue")
if(var(X[,index])>1.0e-20) {acf(as.vector(X[,index]),xlab="",ylab="",main="")}
else
{plot.default(X[,index],xlab="",ylab="",type="n",main="No ACF Produced")}
}
}
invisible()
}
Any scripts or data that you put into this service are public.
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.