dot-plotXVsY.bexy: Function to plot X vs Y counts and color them according to...

In bexy: Visualize and Parse the Output of 'BeXY'

Function to plot X vs Y counts and color them according to BeXY posterior mode

Description

Function to plot X vs Y counts and color them according to BeXY posterior mode

Usage

.plotXVsY.bexy(object, ix_X, ix_Y, colors, sampleNamesToHighlight, label, ...)

Arguments

object	A bexy object.
ix_X	An integer representing the index of the scaffold to be plotted on the x-axis.
ix_Y	An integer representing the index of the scaffold to be plotted on the y-axis.
colors	A vector of length three with the colors for aneuploid, XX and XY samples, respectively.
sampleNamesToHighlight	A vector of sample names that should be highlighted. If empty, samples are automatically highlighted based on the posterior probabilities.
label	Boolean indicating whether samples should be labeled.
...	Other parameters used for plotting

Value

No return value, called for side effects.

bexy documentation built on Sept. 11, 2024, 5:50 p.m.