plotAutosomalTrisomy: Plotting the autosomal trisomies

In bexy: Visualize and Parse the Output of 'BeXY'

Plotting the autosomal trisomies

Description

Plotting the autosomal trisomies

Usage

plotAutosomalTrisomy(
  x,
  scaffoldName,
  colors = c("deepskyblue4", "darkred"),
  sampleNamesToHighlight = c(),
  label = TRUE,
  ...
)

Arguments

x	A bexy object.
scaffoldName	The name of the scaffold to plot (has to be an autosome)
colors	A vector of length two with the colors for diploid and triploid samples, respectively.
sampleNamesToHighlight	A vector of sample names that should be highlighted. If empty, samples are automatically highlighted based on the posterior probabilities.
label	Boolean indicating whether samples should be labeled.
...	Other parameters used for plotting.

Value

No return value, called for side effects.

See Also

bexy

Examples

bex <- bexy()
plotAutosomalTrisomy(bex, "21")

bexy documentation built on Sept. 11, 2024, 5:50 p.m.