writePosteriorModeScaffoldTypes: Write a file with the posterior mode for each scaffold type

In bexy: Visualize and Parse the Output of 'BeXY'

Write a file with the posterior mode for each scaffold type

Description

Write a file with the posterior mode for each scaffold type

Usage

writePosteriorModeScaffoldTypes(object, file, threshold_certainty = 0.9)

Arguments

object	A bexy object.
file	The name of the output file.
threshold_certainty	The threshold for certainty on the posterior probabilities. All scaffolds that have a posterior probability less than this threshold are classified as 'uncertain'.

Value

No return value, called for side effects.

See Also

bexy

Examples

bex <- bexy()
tf <- tempfile(fileext = ".txt")
writePosteriorModeScaffoldTypes(bex, tf)

bexy documentation built on Sept. 11, 2024, 5:50 p.m.