getPosteriorModeAutosomalTrisomy: Getting the posterior mode for each autosomal trisomy

In bexy: Visualize and Parse the Output of 'BeXY'

Getting the posterior mode for each autosomal trisomy

Description

Getting the posterior mode for each autosomal trisomy

Usage

getPosteriorModeAutosomalTrisomy(
  object,
  scaffoldName,
  threshold_certainty = 0.9
)

Arguments

object	A bexy object.
scaffoldName	The scaffold name, must be an autosome.
threshold_certainty	The threshold for certainty on the posterior probabilities. All samples that have a posterior probability less than this threshold are classified as 'uncertain'.

Value

A character vector containing the trisomy classification for each sample for the given scaffold

See Also

bexy

Examples

bex <- bexy()
getPosteriorModeAutosomalTrisomy(bex, "21")

bexy documentation built on Sept. 11, 2024, 5:50 p.m.