biclust: BiCluster Algorithms

The main function biclust() provides several algorithms to find biclusters in two-dimensional data: Cheng and Church (2000, ISBN:1-57735-115-0), spectral (2003) <doi:10.1101/gr.648603>, plaid model (2005) <doi:10.1016/j.csda.2004.02.003>, xmotifs (2003) <doi:10.1142/9789812776303_0008> and bimax (2006) <doi:10.1093/bioinformatics/btl060>. In addition, the package provides methods for data preprocessing (normalization and discretisation), visualisation, and validation of bicluster solutions.

Getting started

Package details

AuthorSebastian Kaiser, Rodrigo Santamaria, Tatsiana Khamiakova, Martin Sill, Roberto Theron, Luis Quintales, Friedrich Leisch and Ewoud De Troyer.
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:

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biclust documentation built on May 2, 2019, 1:26 a.m.