bimax.grid: Parameter Grid for BCBimax Biclustering

Description Usage Arguments Value Author(s) See Also Examples

View source: R/ensemble.R

Description

Generates a list containing parameter settings for the ensemble algorithm.

Usage

1
bimax.grid(method = "BCBimax", minr = c(10, 11), minc = c(10, 11), number = 10)

Arguments

method

Here BCBimax, to perform Bimax algorithm

minr

Minimum row size of resulting bicluster.

minc

Minimum column size of resulting bicluster.

number

Number of Bicluster to be found.

Value

A list containing parameter settings

Author(s)

Sebastian Kaiser sebastian.kaiser@stat.uni-muenchen.de

See Also

ensemble, BCBimax

Examples

1

Example output

Loading required package: MASS
Loading required package: grid
Loading required package: colorspace
Loading required package: lattice
[[1]]
[[1]]$method
[1] "BCBimax"

[[1]]$minr
[1] 10

[[1]]$minc
[1] 10

[[1]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[2]]
[[2]]$method
[1] "BCBimax"

[[2]]$minr
[1] 11

[[2]]$minc
[1] 10

[[2]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[3]]
[[3]]$method
[1] "BCBimax"

[[3]]$minr
[1] 10

[[3]]$minc
[1] 11

[[3]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"



[[4]]
[[4]]$method
[1] "BCBimax"

[[4]]$minr
[1] 11

[[4]]$minc
[1] 11

[[4]]$number
[1] 10

attr(,"out.attrs")
attr(,"out.attrs")$dim
method   minr   minc number 
     1      2      2      1 

attr(,"out.attrs")$dimnames
attr(,"out.attrs")$dimnames$method
[1] "method=BCBimax"

attr(,"out.attrs")$dimnames$minr
[1] "minr=10" "minr=11"

attr(,"out.attrs")$dimnames$minc
[1] "minc=10" "minc=11"

attr(,"out.attrs")$dimnames$number
[1] "number=10"

biclust documentation built on May 25, 2021, 5:09 p.m.

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