Files in bioregion
Comparison of Bioregionalization Methods
MD5
NAMESPACE
DESCRIPTION
R/RcppExports.R
R/map_bioregions.R
R/netclu_labelprop.R
R/IHCT.R
R/nhclu_clarans.R
R/net_to_mat.R
R/netclu_louvain.R
R/hclu_diana.R
R/dissimilarity.R
R/betapart_to_bioregion.R
R/netclu_greedy.R
R/bioregion_metrics.R
R/install_binaries.R
R/nhclu_affprop.R
R/data.R
R/netclu_leadingeigen.R
R/generic_functions.R
R/compare_bioregionalizations.R
R/hclu_hierarclust.R
R/similarity.R
R/mat_to_net.R
R/nhclu_dbscan.R
R/site_species_subset.R
R/nhclu_clara.R
R/nhclu_kmeans.R
R/bind_pairwise.R
R/netclu_beckett.R
R/package.R
R/exportGDF.R
R/site_species_metrics.R
R/cut_tree.R
R/find_optimal_n.R
R/netclu_infomap.R
R/bioregionalization_metrics.R
R/bioregion_colors.R
R/similarity_dissimilarity_conversion.R
R/nhclu_pam.R
R/as_bioregion_pairwise.R
R/netclu_oslom.R
R/hclu_optics.R
R/netclu_walktrap.R
R/netclu_leiden.R
R/utils.R
src/RcppExports.cpp
src/abc.cpp
inst/REFERENCES.bib
inst/CITATION
inst/doc/bioregion.Rmd
inst/doc/bioregion.R
inst/doc/bioregion.html
build/vignette.rds
build/partial.rdb
vignettes/style_citation.csl
vignettes/bioregion.Rmd
vignettes/journal-of-biogeography.csl
data/fishsf.rda
data/fishdf.rda
data/vegesf.rda
data/fishmat.rda
data/vegedf.rda
data/vegemat.rda
man/fishmat.Rd
man/bind_pairwise.Rd
man/hclu_optics.Rd
man/similarity_to_dissimilarity.Rd
man/dissimilarity_to_similarity.Rd
man/exportGDF.Rd
man/net_to_mat.Rd
man/vegesf.Rd
man/compare_bioregionalizations.Rd
man/vegedf.Rd
man/site_species_subset.Rd
man/betapart_to_bioregion.Rd
man/netclu_walktrap.Rd
man/nhclu_affprop.Rd
man/nhclu_clarans.Rd
man/nhclu_dbscan.Rd
man/nhclu_clara.Rd
man/install_binaries.Rd
man/bioregionalization_metrics.Rd
man/netclu_leiden.Rd
man/find_optimal_n.Rd
man/netclu_leadingeigen.Rd
man/netclu_oslom.Rd
man/hclu_hierarclust.Rd
man/fishdf.Rd
man/dissimilarity.Rd
man/netclu_labelprop.Rd
man/netclu_infomap.Rd
man/cut_tree.Rd
man/netclu_beckett.Rd
man/nhclu_kmeans.Rd
man/hclu_diana.Rd
man/fishsf.Rd
man/netclu_louvain.Rd
man/mat_to_net.Rd
man/similarity.Rd
man/bioregion_metrics.Rd
man/bioregion_colors.Rd
man/as_bioregion_pairwise.Rd
man/site_species_metrics.Rd
man/map_bioregions.Rd
man/vegemat.Rd
man/nhclu_pam.Rd
man/netclu_greedy.Rd
man/figures/workflow_nonetwork.png
man/figures/core_terms.svg
man/figures/workflow_network.svg
man/figures/05_network_fish_unipartite_weighted.png
man/figures/workflow_network.png
man/figures/05_network_fish_bipartite_colored.png
man/figures/05_network_fish_basic.png
man/figures/workflow_nonetwork.svg
man/figures/comparison_Jaccard.png
man/figures/workflow.png
man/figures/workflow.svg
man/figures/comparison_Bray-Curtis.png
man/figures/05_map_fish_bipartite_infomap.png
man/figures/logo.svg
man/figures/find_optimal_n.png
