getAdjacancyMat: getAdjacancyMat
In comradesOO: Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data
View source: R/commonHelpersAndMethods.R
getAdjacancyMat R Documentation
getAdjacancyMat
Description
Makes and adjacency matrix list (for clustering)
Usage
getAdjacancyMat(hybGranges, nucletideOrPerc, cutoff)
Arguments
hybGranges
list created with hybToGRanges (but just the gap section of the list)
nucletideOrPerc
measure difference by percentage or nucleotides
cutoff
The maximum difference before giving these two gaps 0
Details
Makes and adjacency matrix list (for clustering)
Value
A list of Adjacancy matrices
comradesOO documentation built on Nov. 10, 2023, 5:08 p.m.
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View source: R/commonHelpersAndMethods.R
| getAdjacancyMat | R Documentation |
getAdjacancyMat
Description
Makes and adjacency matrix list (for clustering)
Usage
getAdjacancyMat(hybGranges, nucletideOrPerc, cutoff)
Arguments
hybGranges |
list created with hybToGRanges (but just the gap section of the list) |
nucletideOrPerc |
measure difference by percentage or nucleotides |
cutoff |
The maximum difference before giving these two gaps 0 |
Details
Makes and adjacency matrix list (for clustering)
Value
A list of Adjacancy matrices
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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