getReverseInteractions: getReverseInteractions

In comradesOO: Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data

getReverseInteractions

Description

This method prints interactions of the RNA of interest on another RNA transcript.

Usage

getReverseInteractions(cds, interactor)

Arguments

cds	a comradesDataSet object
interactor	The rna to show interactions with

Value

A long format table shoing the read coverage of chosen RNA

Examples

cds = makeExampleComradesDataSet()
getReverseInteractions(cds, 'transcript2')

comradesOO documentation built on Nov. 10, 2023, 5:08 p.m.