getInteractions: getInteractions

In comradesOO: Analysis of COMRADES (Cross-Linking Matched RNA and Deep Sequencing) Data

getInteractions

Description

This method returns a table interactions of an RNA (interactor) on the RNA of interest use topInteracters.

Usage

getInteractions(cds, interactor)

Arguments

cds	a comradesDataSet object
interactor	The rna to show interactions with

Value

A table showign the read coverage of the interacting RNA

Examples

cds = makeExampleComradesDataSet()
getInteractions(cds, 'transcript2')

comradesOO documentation built on Nov. 10, 2023, 5:08 p.m.