build_top_metaplot: Top metadata-hap bar plot

In crosshap: Local Haplotype Clustering and Visualization

Top metadata-hap bar plot

Description

build_top_metaplot() builds a vertical stacked bar plot displaying the frequency of each haplotype combination, broken down by each categorical metadata variable provided. Makes use of the $Indfile information from a haplotype object. This is an in internal function called by crosshap_viz(), though can be called separately to build a stand-alone plot

Usage

build_top_metaplot(HapObject, epsilon, hide_labels = FALSE)

Arguments

HapObject	Haplotype object created by run_haplotyping()
epsilon	Epsilon to visualize haplotyping results for.
hide_labels	If TRUE, legend is hidden.

Value

A ggplot2 object.

Examples

build_top_metaplot(HapObject, epsilon = 0.6, hide_labels = FALSE)

crosshap documentation built on May 29, 2024, 1:13 a.m.