consensus: Take the list of denoised sequences and obtain the consensus...
In debar: A Post-Clustering Denoiser for COI-5P Barcode Data
Description
Usage
Arguments
Value
See Also
Examples
Description
Take the list of denoised sequences and obtain the consensus sequence.
Usage
1
Arguments
x
The list of adjusted DNA sequences, post censorship and AA correction
Value
A string containing the consensus nucleotide sequence.
See Also
Examples
1
2
3
4
#denoise list of sequences with the k
ex_out = denoise_list(ex_nt_list, keep_flanks=FALSE)
barcode_seq = consensus_sequence(ex_out)
debar documentation built on Jan. 11, 2020, 9:31 a.m.
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Description Usage Arguments Value See Also Examples
Description
Take the list of denoised sequences and obtain the consensus sequence.
Usage
1 |
Arguments
x |
The list of adjusted DNA sequences, post censorship and AA correction |
Value
A string containing the consensus nucleotide sequence.
See Also
Examples
1 2 3 4 | #denoise list of sequences with the k
ex_out = denoise_list(ex_nt_list, keep_flanks=FALSE)
barcode_seq = consensus_sequence(ex_out)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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