sample.mut.ref: Example input to mut.to.sigs.input()
In deconstructSigs: Identifies Signatures Present in a Tumor Sample
Description
Format
Details
Source
Description
A data frame containing example mutations that can be used as input to
mut.to.sigs.input(). Data comes from two TCGA LUAD patients
(http://cancergenome.nih.gov/) Contains the following columns:
Format
A data frame of 657 rows and 5 column that contains example mutations
which could be used in mut.to.sigs.input()
Details
Sample - sample name
chr - chromosome number
pos -
chromosome position
ref - reference base
alt - alternate base
Source
deconstructSigs documentation built on May 2, 2019, 4:06 a.m.
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Description Format Details Source
Description
A data frame containing example mutations that can be used as input to mut.to.sigs.input(). Data comes from two TCGA LUAD patients (http://cancergenome.nih.gov/) Contains the following columns:
Format
A data frame of 657 rows and 5 column that contains example mutations which could be used in mut.to.sigs.input()
Details
Sample - sample name
chr - chromosome number
pos - chromosome position
ref - reference base
alt - alternate base
Source
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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