updateW_GR: Updates the weights matrix

In deconstructSigs: Identifies Signatures Present in a Tumor Sample

Description

Determines what proportion of what signature, when added to the current weights matrix, results in the lowest sum-squared error

Usage

updateW_GR(tumor, signatures, w, signatures.limit, bound = 100)

Arguments

tumor	Actual trinucleotide context fractions
signatures	Signatures matrix
w	Weights matrix
signatures.limit	Number of signatures to limit the search to

Value

Returns an updated weights matrix

deconstructSigs documentation built on May 2, 2019, 4:06 a.m.