plotSignatures: Plots the result from whichSignatures()
In deconstructSigs: Identifies Signatures Present in a Tumor Sample
Description
Usage
Arguments
Value
Examples
Description
Uses the output from whichSignatures() and creates a plot of the given tumor
mutational spectrum and the calculated one
Usage
1
plotSignatures(sigs.output, sub = "")
Arguments
sigs.output
The list output from whichSignatures()
sub
A character vector that specifies cancer subtype for plot title,
if wanted
Value
Plots the trinucleotide frequency for the given tumor on the top
panel, the calculated one on the middle panel, and the difference between
the two on the bottom panel.
Examples
1
plotSignatures(example.output, sub = "example")
Example output
deconstructSigs documentation built on May 2, 2019, 4:06 a.m.
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Description Usage Arguments Value Examples
Description
Uses the output from whichSignatures() and creates a plot of the given tumor mutational spectrum and the calculated one
Usage
1 | plotSignatures(sigs.output, sub = "")
|
Arguments
sigs.output |
The list output from whichSignatures() |
sub |
A character vector that specifies cancer subtype for plot title, if wanted |
Value
Plots the trinucleotide frequency for the given tumor on the top panel, the calculated one on the middle panel, and the difference between the two on the bottom panel.
Examples
1 | plotSignatures(example.output, sub = "example")
|
Example output
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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