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Identification of debris-containing droplets from a droplet-based single cell/nucleus RNA-seq. 'diem' uses the expression profile of background RNA droplets, followed by expectation maximization (EM), to assign candidates as debris or nuclei. See Alvarez M, Rahmani E, et al (2019) <doi:10.1101/786285> for details.
Package details |
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Author | Marcus Alvarez [aut, cre], Elior Rahmani [aut] |
Maintainer | Marcus Alvarez <malvarez@mednet.ucla.edu> |
License | GPL-3 |
Version | 1.0 |
URL | https://www.biorxiv.org/content/10.1101/786285v2 |
Package repository | View on CRAN |
Installation |
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