API for diem
Debris-Containing Droplet Identification using EM

Global functions
SCE Man page
SCE-class Man page
barcode_rank_plot Man page Source code
call_targets Man page Source code
colnames.SCE Source code
convert_to_seurat Man page Source code
create_SCE Man page Source code
diem Man page Source code
dim.SCE Source code
divide_by_colsum Man page Source code
dmmn Man page Source code
dmultinom_sparse Man page Source code
droplet_data Man page Source code
e_step_mn Man page Source code
em Man page Source code
fast_varCPP Source code
fill_counts Man page Source code
filter_genes Man page Source code
fraction_log Man page Source code
gene_data Man page Source code
get_clean_ids Man page Source code
get_gene_pct Man page Source code
get_knn Man page Source code
get_removed_ids Man page Source code
get_var_genes Man page Source code
init_param Man page Source code
initialize_clusters Man page Source code
m_step_mn Man page Source code
mb_small Man page
norm_counts Man page Source code
normalize_data Man page Source code
plot_umi_gene Man page Source code
plot_umi_gene_call Man page Source code
raw_counts Man page Source code
read_10x Man page Source code
rownames.SCE Source code
run_em Man page Source code
set_breaks_10 Source code
set_cluster_set Man page Source code
set_debris_test_set Man page Source code
sum_log Man page Source code
diem documentation built on Nov. 16, 2019, 1:08 a.m.