droplet_data: Return the droplet data from an SCE object
In diem: Debris-Containing Droplet Identification using EM
Description
Usage
Arguments
Value
Description
Return the data frame stored in the slot droplet_data. This
contains data such as number of counts and genes in each droplet, as
well as some of the output from the filtering, such as whether the
droplet is classified as debris or cell/nucleus. The parameter
min_counts filters out droplets (rows) by removing those
with counts below this number
Usage
1
droplet_data(x, min_counts = 1)
Arguments
x
An SCE object.
min_counts
Minimum number of read counts a droplet must have to
be output.
Value
A data frame
diem documentation built on Nov. 16, 2019, 1:08 a.m.
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Description Usage Arguments Value
Description
Return the data frame stored in the slot droplet_data. This
contains data such as number of counts and genes in each droplet, as
well as some of the output from the filtering, such as whether the
droplet is classified as debris or cell/nucleus. The parameter
min_counts filters out droplets (rows) by removing those
with counts below this number
Usage
1 | droplet_data(x, min_counts = 1)
|
Arguments
x |
An SCE object. |
min_counts |
Minimum number of read counts a droplet must have to be output. |
Value
A data frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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