fitPoly: Genotype Calling for Bi-Allelic Marker Assays

Genotyping assays for bi-allelic markers (e.g. SNPs) produce signal intensities for the two alleles. 'fitPoly' assigns genotypes (allele dosages) to a collection of polyploid samples based on these signal intensities. 'fitPoly' replaces the older package 'fitTetra' that was limited (a.o.) to only tetraploid populations whereas 'fitPoly' accepts any ploidy level. Reference: Voorrips RE, Gort G, Vosman B (2011) <doi:10.1186/1471-2105-12-172>.

Getting started

Package details

AuthorRoeland E. Voorrips and Gerrit Gort
MaintainerRoeland E. Voorrips <[email protected]>
LicenseGPL-2
Version3.0.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("fitPoly")

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fitPoly documentation built on May 2, 2019, 6:13 a.m.